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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795391.1_cds_XP_016443841.1_3811
CDS Infomation

[gene=LOC107769153] [db_xref=GeneID:107769153] [protein=E3 ubiquitin-protein ligase At4g11680-like isoform X5] [protein_id=XP_016443841.1] [location=complement(join(10398..10411,11102..11436,11840..11962,14218..14669))] [gbkey=CDS]
Sequence

ATGGACCAAGAATTTCAAAGAAATTTAATTAGTGAAAATGGTGGTTTTGAACAGAGCTAT
TTTAGAGGTTTAGGTACCCCCTTTTCTTGGTATTTTTCAAGAATGGCCTCATATTTGAAC
CCACAAAACCACCATCAAAGTTTTGATGATGATGGGGTTGTTTCTTATGATGATGATGAT
GCATCACCATTTTGTTATTATGGATACTCAAGACCCATTGTGGTTCTTGATGTAATATGG
AACTTGGCATTTGTTTGTGTTTCTTGTTTTGTGCTATTGACCACTTTAAGTGAAAGGCCT
TCTACTCCTTTAAGGCTTTGGATTGGTGGCTATGCACTTCAGTGCCTATTGCATGTGGGT
TTTATTTGGATTGAGTTTCAAAGAAGGAGTTTTGATGATTTTGATGCTGTCAATTTTGAT
GGAGTTTCTTCCTTTTCACTGTTTCAAAGCAGCAGCATCATGAAGAGGCTGGAATCAGTT
AATACTGTGATTTCATCTATCTGGTGGGTGTTTGGCTTTTACTGGATTGTTATAGGTGGC
CAGCTACTTCTGCAAGACTCACCTCGTCTTTACTGGTTATCAGTGGTCTTCCTTGCATTT
GATGTGTTCTTTATGGTCTTTTGCATTGTGATGGCATGTGTACTCTTCTTCGCGCTCTTT
TGTTTCTTTCCATTTATAGCAACAGTTGCATATGCCATGAGACTTGGAGATGGAGCATCT
GAAAATGATATCGAGACTCTTCCCAAGTATAGATATGGTCAATCAAATACTTCAGGGAAC
CTTGTAAATGTGAAGACAGGAGAAGATCACTCAAATGTTAATGCGAAGACAGGAGAAGAT
CACTTCGTATCACAGTTCAACAGTAGTGATTCTGTACCTGAGCTTGCTCTTCAACCAGAT
GATTCTGTAAAGTGGAAAAAGTAG

Peptide Sequence

PEP ID

XP_016443841.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform X5 [Nicotiana tabacum]
Sequence

MDQEFQRNLISENGGFEQSYFRGLGTPFSWYFSRMASYLNPQNHHQSFDDDGVVSYDDDD
ASPFCYYGYSRPIVVLDVIWNLAFVCVSCFVLLTTLSERPSTPLRLWIGGYALQCLLHVG
FIWIEFQRRSFDDFDAVNFDGVSSFSLFQSSSIMKRLESVNTVISSIWWVFGFYWIVIGG
QLLLQDSPRLYWLSVVFLAFDVFFMVFCIVMACVLFFALFCFFPFIATVAYAMRLGDGAS
ENDIETLPKYRYGQSNTSGNLVNVKTGEDHSNVNAKTGEDHFVSQFNSSDSVPELALQPD
DSVKWKK

Transcript Sequence

Gene sequence data has not been registered.